Biblio

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2023
Ton M-LNu, Keitley D, Theeuwes B, Guibentif C, Ahnfelt-Rønne J, Andreassen TKjærgaard, Calero-Nieto FJ, Imaz-Rosshandler I, Pijuan-Sala B, Nichols J, et al. An atlas of rabbit development as a model for single-cell comparative genomics. Nat Cell Biol. 2023.
Cooke CB, Barrington C, Baillie-Benson P, Nichols J, Moris N. Gastruloid-derived Primordial Germ Cell-like Cells (Gld-PGCLCs) develop dynamically within integrated tissues. Development. 2023.
Kohler TN, De Jonghe J, Ellermann AL, Yanagida A, Herger M, Slatery EM, Weberling A, Munger C, Fischer K, Mulas C, et al. Plakoglobin is a mechanoresponsive regulator of naive pluripotency. Nat Commun. 2023;14(1):4022.
Farley AMary, Chengrui A, Palmer S, Liu D, Kousa AI, Rouse P, Major V, Sweetman J, Morys J, Corsinotti A, et al. Thymic epithelial cell fate and potency in early organogenesis assessed by single cell transcriptional and functional analysis. Front Immunol. 2023;14:1202163.
Imaz-Rosshandler I, Rode C, Guibentif C, Harland LTG, Ton M-LN, Dhapola P, Keitley D, Argelaguet R, Calero-Nieto FJ, Nichols J, et al. Tracking early mammalian organogenesis - prediction and validation of differentiation trajectories at whole organism scale. Development. 2023.
2022
Nichols J, Lima A, Rodríguez TA. Cell competition and the regulative nature of early mammalian development. Cell Stem Cell. 2022;29(7):1018-1030.
Yanagida A, Corujo-Simon E, Revell CK, Sahu P, Stirparo GG, Aspalter IM, Winkel AK, Peters R, De Belly H, Cassani DAD, et al. Cell surface fluctuations regulate early embryonic lineage sorting. Cell. 2022.
Radley A, Corujo-Simon E, Nichols J, Smith A, Dunn S-J. Entropy sorting of single-cell RNA sequencing data reveals the inner cell mass in the human pre-implantation embryo. Stem Cell Reports. 2022.
2021
Guo G, Stirparo GGiuseppe, Strawbridge SE, Spindlow D, Yang J, Clarke J, Dattani A, Yanagida A, Li MAmy, Myers S, et al. Human naive epiblast cells possess unrestricted lineage potential. Cell Stem Cell. 2021.
Yanagida A, Spindlow D, Nichols J, Dattani A, Smith A, Guo G. Naive stem cell blastocyst model captures human embryo lineage segregation. Cell Stem Cell. 2021.
2019
Zhang W, Chronis C, Chen X, Zhang H, Spalinskas R, Pardo M, Chen L, Wu G, Zhu Z, Yu Y, et al. The BAF and PRC2 Complex Subunits Dpf2 and Eed Antagonistically Converge on Tbx3 to Control ESC Differentiation. Cell Stem Cell. 2019;24(1):138-152.e8.
2018
Rulands S, Lee HJ, Clark SJ, Angermueller C, Smallwood SA, Krueger F, Mohammed H, Dean W, Nichols J, Rugg-Gunn P, et al. Genome-Scale Oscillations in DNA Methylation during Exit from Pluripotency. Cell Syst. 2018.
2015
Nichols J, Boroviak T. Maximizing Clonal Embryonic Stem Cell Derivation by ERK Pathway Inhibition. Methods Mol Biol. 2015.
2013
Betschinger J, Nichols J, Dietmann S, Corrin PD, Paddison PJ, Smith A. Exit from Pluripotency Is Gated by Intracellular Redistribution of the bHLH Transcription Factor Tfe3. Cell. 2013;153(2):335-47.
Leitch HG, Nichols J, Humphreys P, Mulas C, Martello G, Lee C, Jones K, M Surani A, Smith A. Rebuilding pluripotency from primordial germ cells. Stem Cell Reports. 2013;1(1):66-78.